Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912142.1_cds_XP_016462164.1_55417
CDS Infomation

[gene=LOC107785386] [db_xref=GeneID:107785386] [protein=pectinesterase-like isoform X2] [protein_id=XP_016462164.1] [location=join(33784..34741,35246..35647,36540..36826)] [gbkey=CDS]
Sequence

ATGGCTACTAATTCCTCTCAACCATTGTTAGACACTCTCACAACAAAATCCTCCTCCTCT
AAAGCTCTCTATGTTCTTCTCTCCTTTGTTGCTATTGTGGGCTCAGTTGGATTAGTTTCA
ATCTGGACCATCAATAGCAGCAGCCCATCTCTTTCTTTGATAGCCCATGTTTGTGATCGT
GCCCAAGATCAACCATCTTGCTTGGCCATGGTGTCTGAGGTTGCACCTACTGGTGTGATG
GATACAAAAACAGTGGATTTACTACAGATGGTTTTACATAAATCATCGTTAAAAATCCAT
GAGGCGATCGATTTAGTGAGAAATGTGAACAGTAGGATTAATAATGACAAGGAGCAAGCA
GCTCTAGCAGATTGTCTAGAGTTAATGGATTTGTCAAGGGACAGATTAATGGACTCCATG
ATGTCACTTGGGAACTTATCGACCCAAGTTCATTTTGATGTCCATACATGGCTAAGTAGC
ATTCTGACTAACCATGTTACTTGCAAAGATGGGCTAAATGGACTGGTCCAGTCCATTATG
GAGCCCATGTTGAAGGATTTGATAACAAGGGCAAAGACTTCCTTAGCCTTGATGGTTAAA
ATGGCACCAGTCAAAACCATGGATCTTCCATCAGTTACTGATGGATTGCCATCATGGGTT
ACTCCTAATGACAGAAAGCTTTTGCAACTTTCTGCAAATGCCATAAAAGCCAATGTAATA
GTGGCAAAAGATGGTAGTGGAAAATATAAGACTGTAAAGGAAGCAGTTGCATCTGCTCCA
GATAATAGCAAGACTCGGTATGTTATATATGTGAAAAAAGGAATATACAAAGAGAATGTT
GAGATTGGGAAAAAGAAGAAGAATGTTATGCTTGTTGGTGATGGCATGGATGCTACTATT
ATCACTGGGAGCTTGAATTTTGTGGATGGCTCAACAACCTTCAAATCTGCCACTGTTGCT
GCTGTTGGGGATGGATTCATAGCCCAAGATCTGCAGTTTCAAAACACAGCAGGACCATCA
AAACACCAAGCAGTAGCACTTCGAATTGGAGCAGATCAATCAGTCATCAATCGTTGCAAA
ATAGATGCATTCCAAGACACCCTCTACACTCACAGCCTTCGTCAATTCTATAGAGATTGT
TACATCGCTGGCACTGTTGATTTCATCTTTGGTAATGCTGCAGTTGTGTTCCAAAACTCA
AAAATCGCAGCACGAAAGCCCGGGAGTGGACAAAAGAACATGGTTACAGCTCAAGGTCGT
GAAGATCCAAACCAAAATACAGGAACTTCAATCCAAAATTGTGACATTATTGCTAGCTCA
GACCTTGCACCAGTGAAAGGGTCGGTTAAGACATATTTGGGCCGTCCATGGAAAGCGTAC
TCACGAACTGTATTTATGCAGTCCAATATTGGAGACCATATTGATCCAGAAGGTTGGTCA
GTATGGCAAGGCGATTTTGCCTTGAAAACTTTATATTATGGTGAGTATATGAACAAAGGA
CCTGGAGCTGGAACTAGTAAGAGAGTGAAGTGGCCCGGTTATCATGTTTTAAGTGCTTCA
GAGGCGACGAAATTCACAGTAAGTCAGCTGATTCAAGGAGGAGTATGGTTGAAATCTACT
GGTGTCGCTTACACTGAGGGCTTGTGA

Peptide Sequence

PEP ID

XP_016462164.1
PEP Infomation

PREDICTED: pectinesterase-like isoform X2 [Nicotiana tabacum]
Sequence

MATNSSQPLLDTLTTKSSSSKALYVLLSFVAIVGSVGLVSIWTINSSSPSLSLIAHVCDR
AQDQPSCLAMVSEVAPTGVMDTKTVDLLQMVLHKSSLKIHEAIDLVRNVNSRINNDKEQA
ALADCLELMDLSRDRLMDSMMSLGNLSTQVHFDVHTWLSSILTNHVTCKDGLNGLVQSIM
EPMLKDLITRAKTSLALMVKMAPVKTMDLPSVTDGLPSWVTPNDRKLLQLSANAIKANVI
VAKDGSGKYKTVKEAVASAPDNSKTRYVIYVKKGIYKENVEIGKKKKNVMLVGDGMDATI
ITGSLNFVDGSTTFKSATVAAVGDGFIAQDLQFQNTAGPSKHQAVALRIGADQSVINRCK
IDAFQDTLYTHSLRQFYRDCYIAGTVDFIFGNAAVVFQNSKIAARKPGSGQKNMVTAQGR
EDPNQNTGTSIQNCDIIASSDLAPVKGSVKTYLGRPWKAYSRTVFMQSNIGDHIDPEGWS
VWQGDFALKTLYYGEYMNKGPGAGTSKRVKWPGYHVLSASEATKFTVSQLIQGGVWLKST
GVAYTEGL

Transcript Sequence

Gene sequence data has not been registered.